Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 CYP2T1P-201ENST00000432607 1285 ntBASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 PRORSD1P-202ENST00000563365 2154 ntBASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCL1Q9Y2P8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 GNAS-203ENST00000306120 1878 ntBASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 LINC00896-202ENST00000609602 2128 ntBASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 KRT17P1-201ENST00000399211 1546 ntBASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCL1Q9Y2P8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 KRT8P8-201ENST00000434750 1448 ntBASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 AC069236.1-201ENST00000604339 616 ntBASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.37■□□□□ 0.05
RCL1Q9Y2P8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RCL1Q9Y2P8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms