Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RNF6Q9Y252 AL031598.1-201ENST00000561511 1773 ntBASIC17.74■□□□□ 0.43
RNF6Q9Y252 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 AC090340.1-201ENST00000620778 4980 ntBASIC17.73■□□□□ 0.43
RNF6Q9Y252 MMP23A-201ENST00000234610 1017 ntBASIC17.73■□□□□ 0.43
RNF6Q9Y252 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 AL133373.2-201ENST00000623187 2828 ntBASIC17.73■□□□□ 0.43
RNF6Q9Y252 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF6Q9Y252 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF6Q9Y252 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 RCN1P1-201ENST00000400413 996 ntBASIC17.72■□□□□ 0.43
RNF6Q9Y252 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 AC073195.1-201ENST00000607241 877 ntBASIC17.72■□□□□ 0.43
RNF6Q9Y252 AC004264.1-201ENST00000608354 794 ntBASIC17.72■□□□□ 0.43
RNF6Q9Y252 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF6Q9Y252 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF6Q9Y252 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF6Q9Y252 AC020916.1-201ENST00000587762 1774 ntBASIC17.71■□□□□ 0.43
RNF6Q9Y252 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF6Q9Y252 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.71■□□□□ 0.42
RNF6Q9Y252 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms