Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 AC126763.1-201ENST00000552015 2118 ntBASIC16.79■□□□□ 0.28
COPS3Q9UNS2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.79■□□□□ 0.28
COPS3Q9UNS2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.79■□□□□ 0.28
COPS3Q9UNS2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 C1QL1P1-201ENST00000568105 661 ntBASIC16.78■□□□□ 0.28
COPS3Q9UNS2 AL109923.1-201ENST00000618799 583 ntBASIC16.78■□□□□ 0.28
COPS3Q9UNS2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COPS3Q9UNS2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 POM121L13P-201ENST00000422362 380 ntBASIC16.77■□□□□ 0.28
COPS3Q9UNS2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 AC133041.1-202ENST00000642053 222 ntBASIC16.77■□□□□ 0.28
COPS3Q9UNS2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COPS3Q9UNS2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COPS3Q9UNS2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 NBPF21P-201ENST00000425093 1451 ntBASIC16.76■□□□□ 0.27
COPS3Q9UNS2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.76■□□□□ 0.27
COPS3Q9UNS2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms