Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 AC104417.2-201ENST00000562989 1793 ntBASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AC090192.1-201ENST00000517740 490 ntBASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB4Q9UN71 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 KRT18P16-201ENST00000510337 1294 ntBASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 AC083880.1-201ENST00000608266 535 ntBASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGB4Q9UN71 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 AC069152.1-201ENST00000438030 544 ntBASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms