Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 AC093503.3-201ENST00000624917 2352 ntBASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 AC009947.2-201ENST00000444014 672 ntBASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
HDAC6Q9UBN7 IER3-202ENST00000376377 1350 ntBASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HDAC6Q9UBN7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 NEFHP1-201ENST00000412845 2629 ntBASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDAC6Q9UBN7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 KRT18P56-201ENST00000507275 550 ntBASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms