Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PHRF1Q9P1Y6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.15■■□□□ 1.62
PHRF1Q9P1Y6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC25.14■■□□□ 1.62
PHRF1Q9P1Y6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.14■■□□□ 1.62
PHRF1Q9P1Y6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.14■■□□□ 1.62
PHRF1Q9P1Y6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PHRF1Q9P1Y6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PHRF1Q9P1Y6 LINC01006-201ENST00000333319 2292 ntBASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 MIR574-201ENST00000385209 96 ntBASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 AC243591.1-201ENST00000452967 1364 ntBASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.13■■□□□ 1.61
PHRF1Q9P1Y6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 AC018712.1-201ENST00000455767 687 ntBASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 VENTXP7-201ENST00000475503 772 ntBASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 AC139530.3-201ENST00000620344 690 ntBASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 AC125437.2-201ENST00000625180 2167 ntBASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PHRF1Q9P1Y6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 KRT89P-201ENST00000620027 1478 ntBASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 AL590627.1-203ENST00000421194 1026 ntBASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.11■■□□□ 1.61
PHRF1Q9P1Y6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 AC124864.1-201ENST00000623408 392 ntBASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHRF1Q9P1Y6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 KRT18P67-201ENST00000432816 1264 ntBASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 RN7SL606P-201ENST00000472779 293 ntBASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 AC005336.2-201ENST00000593183 939 ntBASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC25.09■■□□□ 1.61
PHRF1Q9P1Y6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms