Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC079776.4-201ENST00000511039 504 ntBASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 AC124864.1-201ENST00000623408 392 ntBASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 NSUN5P1-202ENST00000421140 1535 ntBASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 NSUN5P2-203ENST00000457352 1529 ntBASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 AL137060.1-201ENST00000618151 2648 ntBASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SLC52A1Q9NWF4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SLC52A1Q9NWF4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 CYP51A1P1-201ENST00000492267 1507 ntBASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 RNA5SP419-201ENST00000515908 135 ntBASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SLC52A1Q9NWF4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 AF238378.1-201ENST00000526806 358 ntBASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SLC52A1Q9NWF4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 TREX1-205ENST00000625293 1783 ntBASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 VENTXP7-201ENST00000475503 772 ntBASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC52A1Q9NWF4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 AL353692.3-201ENST00000407031 1396 ntBASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms