Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC3Q9NUV7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
SPTLC3Q9NUV7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 RPS2P52-201ENST00000469610 820 ntBASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC3Q9NUV7 AC108860.2-201ENST00000562760 2183 ntBASIC20.7■□□□□ 0.91
SPTLC3Q9NUV7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.7■□□□□ 0.91
SPTLC3Q9NUV7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SPTLC3Q9NUV7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms