Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
GPCPD1Q9NPB8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GPCPD1Q9NPB8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 HOMER2P1-201ENST00000455653 964 ntBASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 MYC-208ENST00000641036 567 ntBASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GPCPD1Q9NPB8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 AL031133.1-201ENST00000406807 723 ntBASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 AL109659.2-201ENST00000606809 1674 ntBASIC21.79■■□□□ 1.08
GPCPD1Q9NPB8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
GPCPD1Q9NPB8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPCPD1Q9NPB8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GPCPD1Q9NPB8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
GPCPD1Q9NPB8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms