Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
VPS11Q9H270 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VPS11Q9H270 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS11Q9H270 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS11Q9H270 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VPS11Q9H270 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VPS11Q9H270 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.94■□□□□ 0.62
VPS11Q9H270 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.94■□□□□ 0.62
VPS11Q9H270 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.94■□□□□ 0.62
VPS11Q9H270 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.94■□□□□ 0.62
VPS11Q9H270 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.94■□□□□ 0.62
VPS11Q9H270 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS11Q9H270 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
VPS11Q9H270 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 AL162741.1-201ENST00000565563 1558 ntBASIC18.93■□□□□ 0.62
VPS11Q9H270 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.93■□□□□ 0.62
VPS11Q9H270 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.93■□□□□ 0.62
VPS11Q9H270 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 AL109923.1-201ENST00000618799 583 ntBASIC18.93■□□□□ 0.62
VPS11Q9H270 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
VPS11Q9H270 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VPS11Q9H270 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS11Q9H270 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VPS11Q9H270 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VPS11Q9H270 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS11Q9H270 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS11Q9H270 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.92■□□□□ 0.62
VPS11Q9H270 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.92■□□□□ 0.62
VPS11Q9H270 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.92■□□□□ 0.62
VPS11Q9H270 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS11Q9H270 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
VPS11Q9H270 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS11Q9H270 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 AC133041.1-202ENST00000642053 222 ntBASIC18.92■□□□□ 0.62
VPS11Q9H270 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS11Q9H270 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS11Q9H270 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms