Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 CROCCP3-202ENST00000420820 1947 ntBASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 AL109659.2-201ENST00000606809 1674 ntBASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.07■□□□□ 0.64
POLR1EQ9GZS1 AC093525.10-201ENST00000625130 1569 ntBASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 LINC01568-207ENST00000641790 1380 ntBASIC19.06■□□□□ 0.64
POLR1EQ9GZS1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.05■□□□□ 0.64
POLR1EQ9GZS1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 MIR4674-201ENST00000582457 87 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 AC145285.6-201ENST00000604632 637 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 AC093503.3-201ENST00000624917 2352 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 Z98044.1-201ENST00000632503 1764 ntBASIC19.04■□□□□ 0.64
POLR1EQ9GZS1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AC008556.1-201ENST00000610908 2040 ntBASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 KRT18P22-201ENST00000402024 1347 ntBASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 INGX-201ENST00000359239 846 ntBASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms