Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 HYMAI.1-201ENST00000620949 238 ntBASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAIPQ9BWF2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 UPK3BP1-201ENST00000428678 509 ntBASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAIPQ9BWF2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 GPAT2P1-201ENST00000444924 1672 ntBASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 PCED1CP-201ENST00000419887 785 ntBASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AL136038.3-201ENST00000561909 1096 ntBASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAIPQ9BWF2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAIPQ9BWF2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 AL023284.2-201ENST00000405850 579 ntBASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 AC116407.4-201ENST00000623319 1061 ntBASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAIPQ9BWF2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 AC093484.2-201ENST00000580996 2166 ntBASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAIPQ9BWF2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms