Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 NBPF21P-201ENST00000425093 1451 ntBASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 AL499627.1-201ENST00000569373 2188 ntBASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 POM121L13P-201ENST00000422362 380 ntBASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 C1QL1P1-201ENST00000568105 661 ntBASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 AC133041.1-202ENST00000642053 222 ntBASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 NOC2LP2-201ENST00000407594 1944 ntBASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDHD3Q9BSH5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 PRKY-204ENST00000533551 1019 ntBASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 FZD10-202ENST00000539839 3282 ntBASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HDHD3Q9BSH5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 ABALON-201ENST00000629058 1903 ntBASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms