Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.23□□□□□ -0.13
AP1S3Q96PC3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 AC100791.3-201ENST00000617619 330 ntBASIC14.22□□□□□ -0.13
AP1S3Q96PC3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 AL138781.2-201ENST00000617896 1843 ntBASIC14.22□□□□□ -0.13
AP1S3Q96PC3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S3Q96PC3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 AC005837.3-201ENST00000612163 286 ntBASIC14.21□□□□□ -0.13
AP1S3Q96PC3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S3Q96PC3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S3Q96PC3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S3Q96PC3 AC016405.3-201ENST00000607710 860 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms