Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 KRT8P45-201ENST00000414328 1447 ntBASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
PDLIM5Q96HC4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 AC008550.1-201ENST00000511500 884 ntBASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 KRT18P41-201ENST00000518924 1277 ntBASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 AP005242.2-201ENST00000580065 1175 ntBASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 AC112777.1-201ENST00000540175 1423 ntBASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM5Q96HC4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 MIR718-201ENST00000390190 70 ntBASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM5Q96HC4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AC104581.1-202ENST00000635932 2618 ntBASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AP003071.4-201ENST00000562276 1284 ntBASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 AC079598.2-202ENST00000546624 1451 ntBASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms