Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDCA5Q96FF9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CDCA5Q96FF9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CDCA5Q96FF9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDCA5Q96FF9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 FAM220CP-201ENST00000395253 831 ntBASIC22■■□□□ 1.11
CDCA5Q96FF9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22■■□□□ 1.11
CDCA5Q96FF9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22■■□□□ 1.11
CDCA5Q96FF9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22■■□□□ 1.11
CDCA5Q96FF9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22■■□□□ 1.11
CDCA5Q96FF9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 PMS2P7-201ENST00000506558 1336 ntBASIC22■■□□□ 1.11
CDCA5Q96FF9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDCA5Q96FF9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 POM121L3P-201ENST00000419331 1163 ntBASIC21.99■■□□□ 1.11
CDCA5Q96FF9 BX842568.4-201ENST00000421222 227 ntBASIC21.99■■□□□ 1.11
CDCA5Q96FF9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 AC093909.1-201ENST00000504731 1122 ntBASIC21.99■■□□□ 1.11
CDCA5Q96FF9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 TERC-201ENST00000602385 541 ntBASIC21.99■■□□□ 1.11
CDCA5Q96FF9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 AL353692.3-201ENST00000407031 1396 ntBASIC21.99■■□□□ 1.11
CDCA5Q96FF9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.99■■□□□ 1.11
CDCA5Q96FF9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MIR940-201ENST00000401276 94 ntBASIC21.98■■□□□ 1.11
CDCA5Q96FF9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 AC011840.4-201ENST00000578471 627 ntBASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MIR3180-4-201ENST00000582223 153 ntBASIC21.98■■□□□ 1.11
CDCA5Q96FF9 BNIP3P18-201ENST00000593976 575 ntBASIC21.98■■□□□ 1.11
CDCA5Q96FF9 AL591684.3-201ENST00000605187 298 ntBASIC21.98■■□□□ 1.11
CDCA5Q96FF9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDCA5Q96FF9 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.97■■□□□ 1.11
CDCA5Q96FF9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 AL049840.3-201ENST00000602669 611 ntBASIC21.97■■□□□ 1.11
CDCA5Q96FF9 MIR7706-201ENST00000613747 67 ntBASIC21.97■■□□□ 1.11
CDCA5Q96FF9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDCA5Q96FF9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDCA5Q96FF9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms