Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR1Q969H4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 NUS1P2-201ENST00000417358 873 ntBASIC23.03■■□□□ 1.28
CNKSR1Q969H4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 AL773604.1-201ENST00000617417 272 ntBASIC23.03■■□□□ 1.28
CNKSR1Q969H4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.03■■□□□ 1.28
CNKSR1Q969H4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
CNKSR1Q969H4 GABARAPL3-202ENST00000624044 1851 ntBASIC23.02■■□□□ 1.28
CNKSR1Q969H4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 AC024563.2-201ENST00000603282 481 ntBASIC23.02■■□□□ 1.28
CNKSR1Q969H4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.02■■□□□ 1.28
CNKSR1Q969H4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 TP73-AS1-207ENST00000624167 988 ntBASIC23.02■■□□□ 1.28
CNKSR1Q969H4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR1Q969H4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 AP005901.3-202ENST00000581653 237 ntBASIC23.01■■□□□ 1.27
CNKSR1Q969H4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 AC099778.1-201ENST00000568593 1911 ntBASIC23.01■■□□□ 1.27
CNKSR1Q969H4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR1Q969H4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23■■□□□ 1.27
CNKSR1Q969H4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CNKSR1Q969H4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23■■□□□ 1.27
CNKSR1Q969H4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23■■□□□ 1.27
CNKSR1Q969H4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNKSR1Q969H4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CNKSR1Q969H4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23■■□□□ 1.27
CNKSR1Q969H4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23■■□□□ 1.27
CNKSR1Q969H4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23■■□□□ 1.27
CNKSR1Q969H4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23■■□□□ 1.27
CNKSR1Q969H4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CNKSR1Q969H4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23■■□□□ 1.27
CNKSR1Q969H4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23■■□□□ 1.27
CNKSR1Q969H4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23■■□□□ 1.27
CNKSR1Q969H4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR1Q969H4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR1Q969H4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR1Q969H4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 POM121L3P-201ENST00000419331 1163 ntBASIC22.99■■□□□ 1.27
CNKSR1Q969H4 FAM197Y8-203ENST00000450145 560 ntBASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR1Q969H4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms