Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AL499627.1-201ENST00000569373 2188 ntBASIC20.08■□□□□ 0.81
SHC3Q92529 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.08■□□□□ 0.81
SHC3Q92529 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 AC090164.3-201ENST00000610780 2143 ntBASIC20.08■□□□□ 0.81
SHC3Q92529 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.08■□□□□ 0.81
SHC3Q92529 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 AC079598.2-202ENST00000546624 1451 ntBASIC20.08■□□□□ 0.81
SHC3Q92529 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.08■□□□□ 0.81
SHC3Q92529 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.08■□□□□ 0.81
SHC3Q92529 SNORA78-201ENST00000459373 127 ntBASIC20.08■□□□□ 0.81
SHC3Q92529 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.08■□□□□ 0.81
SHC3Q92529 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
SHC3Q92529 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.08■□□□□ 0.8
SHC3Q92529 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.08■□□□□ 0.8
SHC3Q92529 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.08■□□□□ 0.8
SHC3Q92529 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.08■□□□□ 0.8
SHC3Q92529 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.08■□□□□ 0.8
SHC3Q92529 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHC3Q92529 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.07■□□□□ 0.8
SHC3Q92529 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC3Q92529 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SHC3Q92529 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 UNC93B2-201ENST00000285383 730 ntBASIC20.07■□□□□ 0.8
SHC3Q92529 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.07■□□□□ 0.8
SHC3Q92529 AL023284.2-201ENST00000405850 579 ntBASIC20.07■□□□□ 0.8
SHC3Q92529 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.07■□□□□ 0.8
SHC3Q92529 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC3Q92529 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.07■□□□□ 0.8
SHC3Q92529 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC3Q92529 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.07■□□□□ 0.8
SHC3Q92529 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.07■□□□□ 0.8
SHC3Q92529 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.07■□□□□ 0.8
SHC3Q92529 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.07■□□□□ 0.8
SHC3Q92529 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHC3Q92529 GPAT2P1-201ENST00000444924 1672 ntBASIC20.07■□□□□ 0.8
SHC3Q92529 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.06■□□□□ 0.8
SHC3Q92529 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.06■□□□□ 0.8
SHC3Q92529 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.06■□□□□ 0.8
SHC3Q92529 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 NEFHP1-201ENST00000412845 2629 ntBASIC20.06■□□□□ 0.8
SHC3Q92529 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.06■□□□□ 0.8
SHC3Q92529 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SHC3Q92529 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.06■□□□□ 0.8
SHC3Q92529 AC008556.1-201ENST00000610908 2040 ntBASIC20.06■□□□□ 0.8
SHC3Q92529 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.06■□□□□ 0.8
SHC3Q92529 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 AC073592.3-201ENST00000625118 1834 ntBASIC20.06■□□□□ 0.8
SHC3Q92529 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHC3Q92529 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SHC3Q92529 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SHC3Q92529 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 AC126763.1-201ENST00000552015 2118 ntBASIC20.05■□□□□ 0.8
SHC3Q92529 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SHC3Q92529 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 KRT8P45-201ENST00000414328 1447 ntBASIC20.05■□□□□ 0.8
SHC3Q92529 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SHC3Q92529 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHC3Q92529 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms