Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX1Q92499 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX1Q92499 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX1Q92499 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 NEFHP1-201ENST00000412845 2629 ntBASIC20.04■□□□□ 0.8
DDX1Q92499 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDX1Q92499 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX1Q92499 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX1Q92499 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX1Q92499 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX1Q92499 AC008622.2-201ENST00000617006 1229 ntBASIC20.04■□□□□ 0.8
DDX1Q92499 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DDX1Q92499 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.04■□□□□ 0.8
DDX1Q92499 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DDX1Q92499 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DDX1Q92499 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX1Q92499 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX1Q92499 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX1Q92499 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 AC005082.1-201ENST00000413042 2259 ntBASIC20.03■□□□□ 0.8
DDX1Q92499 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.03■□□□□ 0.8
DDX1Q92499 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.03■□□□□ 0.8
DDX1Q92499 AC087388.1-201ENST00000571370 1112 ntBASIC20.03■□□□□ 0.8
DDX1Q92499 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DDX1Q92499 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX1Q92499 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX1Q92499 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
DDX1Q92499 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX1Q92499 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX1Q92499 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DDX1Q92499 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
DDX1Q92499 MFAP1P1-201ENST00000442257 1255 ntBASIC20.02■□□□□ 0.8
DDX1Q92499 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX1Q92499 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.02■□□□□ 0.8
DDX1Q92499 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DDX1Q92499 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
DDX1Q92499 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX1Q92499 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDX1Q92499 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX1Q92499 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX1Q92499 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX1Q92499 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX1Q92499 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms