Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCG3Q8WXD2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCG3Q8WXD2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCG3Q8WXD2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCG3Q8WXD2 AC090340.1-201ENST00000620778 4980 ntBASIC19.26■□□□□ 0.67
SCG3Q8WXD2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 KRT18P21-201ENST00000515767 1272 ntBASIC19.26■□□□□ 0.67
SCG3Q8WXD2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.26■□□□□ 0.67
SCG3Q8WXD2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 AL031985.4-201ENST00000642138 673 ntBASIC19.26■□□□□ 0.67
SCG3Q8WXD2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SCG3Q8WXD2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 AC020763.4-201ENST00000623414 4170 ntBASIC19.25■□□□□ 0.67
SCG3Q8WXD2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 RBM17P1-201ENST00000453646 1190 ntBASIC19.25■□□□□ 0.67
SCG3Q8WXD2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
SCG3Q8WXD2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 MIR1224-201ENST00000408193 85 ntBASIC19.24■□□□□ 0.67
SCG3Q8WXD2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 C1QL1P1-201ENST00000568105 661 ntBASIC19.24■□□□□ 0.67
SCG3Q8WXD2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
SCG3Q8WXD2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
SCG3Q8WXD2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 AC012306.2-201ENST00000609350 630 ntBASIC19.23■□□□□ 0.67
SCG3Q8WXD2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.23■□□□□ 0.67
SCG3Q8WXD2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms