Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 AC005521.1-201ENST00000393351 872 ntBASIC19.76■□□□□ 0.75
RNF139Q8WU17 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 KRT18P21-201ENST00000515767 1272 ntBASIC19.76■□□□□ 0.75
RNF139Q8WU17 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 KRT8P3-201ENST00000519669 1449 ntBASIC19.76■□□□□ 0.75
RNF139Q8WU17 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 AL512604.3-201ENST00000569583 964 ntBASIC19.75■□□□□ 0.75
RNF139Q8WU17 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.75■□□□□ 0.75
RNF139Q8WU17 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF139Q8WU17 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF139Q8WU17 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.74■□□□□ 0.75
RNF139Q8WU17 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RNF139Q8WU17 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF139Q8WU17 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 TERF1P1-201ENST00000311003 1181 ntBASIC19.73■□□□□ 0.75
RNF139Q8WU17 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF139Q8WU17 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF139Q8WU17 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 RCN1P1-201ENST00000400413 996 ntBASIC19.72■□□□□ 0.75
RNF139Q8WU17 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 FAM210CP-201ENST00000445714 574 ntBASIC19.72■□□□□ 0.75
RNF139Q8WU17 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 AC010203.1-204ENST00000548782 407 ntBASIC19.72■□□□□ 0.75
RNF139Q8WU17 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 AC008622.2-201ENST00000617006 1229 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms