Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 AL512353.2-201ENST00000448759 1962 ntBASIC22.9■■□□□ 1.26
SNED1Q8TER0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 IGHGP-201ENST00000390555 1178 ntBASIC22.9■■□□□ 1.26
SNED1Q8TER0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNED1Q8TER0 AP003733.1-201ENST00000491725 852 ntBASIC22.9■■□□□ 1.26
SNED1Q8TER0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.9■■□□□ 1.26
SNED1Q8TER0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SNED1Q8TER0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.89■■□□□ 1.26
SNED1Q8TER0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SNED1Q8TER0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.89■■□□□ 1.26
SNED1Q8TER0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.89■■□□□ 1.26
SNED1Q8TER0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SNED1Q8TER0 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.89■■□□□ 1.26
SNED1Q8TER0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.89■■□□□ 1.26
SNED1Q8TER0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.89■■□□□ 1.26
SNED1Q8TER0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 TEX21P-204ENST00000641479 1693 ntBASIC22.89■■□□□ 1.25
SNED1Q8TER0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNED1Q8TER0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.89■■□□□ 1.25
SNED1Q8TER0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNED1Q8TER0 SLC25A1P1-201ENST00000528351 927 ntBASIC22.88■■□□□ 1.25
SNED1Q8TER0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.88■■□□□ 1.25
SNED1Q8TER0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 Z69720.1-201ENST00000601483 472 ntBASIC22.87■■□□□ 1.25
SNED1Q8TER0 AC139530.3-201ENST00000620344 690 ntBASIC22.87■■□□□ 1.25
SNED1Q8TER0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 NSUN5P1-202ENST00000421140 1535 ntBASIC22.87■■□□□ 1.25
SNED1Q8TER0 NSUN5P2-203ENST00000457352 1529 ntBASIC22.87■■□□□ 1.25
SNED1Q8TER0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.87■■□□□ 1.25
SNED1Q8TER0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNED1Q8TER0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms