Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 AC124283.5-201ENST00000624661 1809 ntBASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFWD2Q8NHY2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFWD2Q8NHY2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 AC093787.1-201ENST00000450396 207 ntBASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFWD2Q8NHY2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 AC134043.2-201ENST00000624206 2238 ntBASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFWD2Q8NHY2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 AC099398.1-201ENST00000567919 2776 ntBASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.58■□□□□ 0.56
RFWD2Q8NHY2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.57■□□□□ 0.56
RFWD2Q8NHY2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms