Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 AC084018.2-201ENST00000613093 2607 ntBASIC16.25■□□□□ 0.19
BEST4Q8NFU0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 AC010980.2-201ENST00000587099 1412 ntBASIC16.25■□□□□ 0.19
BEST4Q8NFU0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 AC126763.1-201ENST00000552015 2118 ntBASIC16.25■□□□□ 0.19
BEST4Q8NFU0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 AC008894.3-201ENST00000624324 3103 ntBASIC16.25■□□□□ 0.19
BEST4Q8NFU0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST4Q8NFU0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST4Q8NFU0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 AC016769.1-201ENST00000409132 1010 ntBASIC16.23■□□□□ 0.19
BEST4Q8NFU0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 IRX1P1-201ENST00000438849 1838 ntBASIC16.23■□□□□ 0.19
BEST4Q8NFU0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST4Q8NFU0 KRT17P1-201ENST00000399211 1546 ntBASIC16.23■□□□□ 0.19
BEST4Q8NFU0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms