Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.74■□□□□ 0.43
SIMC1Q8NDZ2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 AP000692.2-201ENST00000608391 879 ntBASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIMC1Q8NDZ2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 AC079598.2-202ENST00000546624 1451 ntBASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 RBM17P1-201ENST00000453646 1190 ntBASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 CKBP1-201ENST00000565489 1086 ntBASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 CROCCP3-202ENST00000420820 1947 ntBASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIMC1Q8NDZ2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 AL390955.1-201ENST00000428694 934 ntBASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 SLC25A1P4-201ENST00000567977 778 ntBASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIMC1Q8NDZ2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms