Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 UNC93B7-201ENST00000509439 705 ntBASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 TCF3P1-201ENST00000423021 1937 ntBASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF248Q8NDW4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 AP001271.2-201ENST00000624018 1556 ntBASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 BX119927.1-201ENST00000636596 1552 ntBASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 AC016734.2-201ENST00000624325 1377 ntBASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 MIR3180-1-201ENST00000580374 94 ntBASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 MIR3180-3-201ENST00000584616 94 ntBASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF248Q8NDW4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 AL022342.1-201ENST00000400363 863 ntBASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 IFNL4P1-201ENST00000607083 540 ntBASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 KRT8P11-201ENST00000409686 1436 ntBASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF248Q8NDW4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF248Q8NDW4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF248Q8NDW4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
ZNF248Q8NDW4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF248Q8NDW4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.96■□□□□ 0.46
ZNF248Q8NDW4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms