Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 AC087289.5-201ENST00000586076 3175 ntBASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 AC009947.2-201ENST00000444014 672 ntBASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01555Q8NAE3 AL357033.4-201ENST00000617703 1807 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 BX323043.1-201ENST00000641006 1765 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 TMPOP1-202ENST00000424642 1267 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 AC006011.2-201ENST00000621313 1158 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01555Q8NAE3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
LINC01555Q8NAE3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 MIR564-202ENST00000385049 94 ntBASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 CROCCP3-202ENST00000420820 1947 ntBASIC18.08■□□□□ 0.48
LINC01555Q8NAE3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 BX664615.1-201ENST00000443558 458 ntBASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 AC104076.2-201ENST00000448912 469 ntBASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01555Q8NAE3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms