Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.41■□□□□ 0.54
CPSF7Q8N684 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPSF7Q8N684 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPSF7Q8N684 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 AL162741.1-201ENST00000565563 1558 ntBASIC18.4■□□□□ 0.54
CPSF7Q8N684 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPSF7Q8N684 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPSF7Q8N684 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPSF7Q8N684 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.4■□□□□ 0.54
CPSF7Q8N684 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPSF7Q8N684 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPSF7Q8N684 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
CPSF7Q8N684 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPSF7Q8N684 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.39■□□□□ 0.54
CPSF7Q8N684 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CPSF7Q8N684 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPSF7Q8N684 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
CPSF7Q8N684 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 YBX1P10-201ENST00000444752 975 ntBASIC18.39■□□□□ 0.53
CPSF7Q8N684 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPSF7Q8N684 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.39■□□□□ 0.53
CPSF7Q8N684 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 MTDHP1-201ENST00000605323 784 ntBASIC18.38■□□□□ 0.53
CPSF7Q8N684 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 AL023875.1-201ENST00000640777 796 ntBASIC18.38■□□□□ 0.53
CPSF7Q8N684 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPSF7Q8N684 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPSF7Q8N684 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms