Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC112497.1-201ENST00000624824 639 ntBASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 KRT8P10-201ENST00000450021 1447 ntBASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 MIR3917-201ENST00000580971 93 ntBASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYNPOQ8N3V7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 AL136038.4-201ENST00000603606 1261 ntBASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNPOQ8N3V7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 KRT8P7-201ENST00000533003 1432 ntBASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 TSPY22P-201ENST00000427496 604 ntBASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 DRAXINP1-201ENST00000437611 948 ntBASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 UNC93B7-201ENST00000509439 705 ntBASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 AC079602.3-201ENST00000623931 403 ntBASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNPOQ8N3V7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms