Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 TP73-AS1-210ENST00000637775 1455 ntBASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 AC092720.2-201ENST00000602388 1665 ntBASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
LTBP4Q8N2S1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 AC092474.2-201ENST00000424288 719 ntBASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
LTBP4Q8N2S1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 AC105339.3-201ENST00000560043 636 ntBASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC26.14■■□□□ 1.77
LTBP4Q8N2S1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 PRSS29P-201ENST00000440800 595 ntBASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTBP4Q8N2S1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 AC190387.1-201ENST00000551683 408 ntBASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 AC002310.6-201ENST00000624451 1377 ntBASIC26.12■■□□□ 1.77
LTBP4Q8N2S1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 AC107918.4-202ENST00000641623 219 ntBASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 AC104417.2-201ENST00000562989 1793 ntBASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 INTS4P1-201ENST00000438455 1935 ntBASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC26.11■■□□□ 1.77
LTBP4Q8N2S1 GK-202ENST00000378941 458 ntTSL 3 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 AC012645.4-201ENST00000610691 1061 ntBASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 INIP-202ENST00000374236 874 ntTSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
LTBP4Q8N2S1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms