Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
SIX5Q8N196 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.24■□□□□ 0.67
SIX5Q8N196 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.24■□□□□ 0.67
SIX5Q8N196 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.24■□□□□ 0.67
SIX5Q8N196 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.24■□□□□ 0.67
SIX5Q8N196 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SIX5Q8N196 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.24■□□□□ 0.67
SIX5Q8N196 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIX5Q8N196 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
SIX5Q8N196 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SIX5Q8N196 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SIX5Q8N196 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SIX5Q8N196 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.23■□□□□ 0.67
SIX5Q8N196 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.23■□□□□ 0.67
SIX5Q8N196 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SIX5Q8N196 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.23■□□□□ 0.67
SIX5Q8N196 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SIX5Q8N196 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.23■□□□□ 0.67
SIX5Q8N196 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.23■□□□□ 0.67
SIX5Q8N196 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.23■□□□□ 0.67
SIX5Q8N196 AC099336.1-202ENST00000602961 463 ntBASIC19.23■□□□□ 0.67
SIX5Q8N196 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.23■□□□□ 0.67
SIX5Q8N196 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.23■□□□□ 0.67
SIX5Q8N196 AF228730.7-201ENST00000641842 219 ntBASIC19.23■□□□□ 0.67
SIX5Q8N196 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 AC009237.14-201ENST00000609975 1594 ntBASIC19.23■□□□□ 0.67
SIX5Q8N196 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIX5Q8N196 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.22■□□□□ 0.67
SIX5Q8N196 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.22■□□□□ 0.67
SIX5Q8N196 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.22■□□□□ 0.67
SIX5Q8N196 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.22■□□□□ 0.67
SIX5Q8N196 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SIX5Q8N196 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SIX5Q8N196 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 AP005212.1-201ENST00000581547 1997 ntBASIC19.21■□□□□ 0.67
SIX5Q8N196 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.21■□□□□ 0.67
SIX5Q8N196 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SIX5Q8N196 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
SIX5Q8N196 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.21■□□□□ 0.67
SIX5Q8N196 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.21■□□□□ 0.67
SIX5Q8N196 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 AC090616.6-201ENST00000582640 721 ntBASIC19.21■□□□□ 0.67
SIX5Q8N196 IGHV3-41-201ENST00000613121 348 ntBASIC19.21■□□□□ 0.67
SIX5Q8N196 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
SIX5Q8N196 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms