Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM2Q8N112 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM2Q8N112 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM2Q8N112 WIZP1-201ENST00000531444 2299 ntBASIC18.83■□□□□ 0.61
LSMEM2Q8N112 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSMEM2Q8N112 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 WWOX-216ENST00000569818 525 ntBASIC18.83■□□□□ 0.6
LSMEM2Q8N112 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSMEM2Q8N112 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 AK4P3-201ENST00000418260 669 ntBASIC18.82■□□□□ 0.6
LSMEM2Q8N112 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSMEM2Q8N112 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 AC006011.2-201ENST00000621313 1158 ntBASIC18.81■□□□□ 0.6
LSMEM2Q8N112 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 AL512353.2-201ENST00000448759 1962 ntBASIC18.81■□□□□ 0.6
LSMEM2Q8N112 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSMEM2Q8N112 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 AP006587.1-201ENST00000534129 1502 ntBASIC18.8■□□□□ 0.6
LSMEM2Q8N112 AC005082.1-201ENST00000413042 2259 ntBASIC18.8■□□□□ 0.6
LSMEM2Q8N112 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 C1QL1P1-201ENST00000568105 661 ntBASIC18.8■□□□□ 0.6
LSMEM2Q8N112 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 KRT8P8-201ENST00000434750 1448 ntBASIC18.8■□□□□ 0.6
LSMEM2Q8N112 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 Z98044.1-201ENST00000632503 1764 ntBASIC18.8■□□□□ 0.6
LSMEM2Q8N112 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSMEM2Q8N112 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms