Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 AC012618.2-201ENST00000428058 849 ntBASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 AC233702.5-201ENST00000584107 538 ntBASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 TMEM191A-211ENST00000637163 1067 ntBASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CPNE9Q8IYJ1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 Z99916.2-201ENST00000604037 246 ntBASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 FSCN1P1-201ENST00000568912 1481 ntBASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE9Q8IYJ1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 Z98044.1-201ENST00000632503 1764 ntBASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 NUDT16P1-203ENST00000513809 620 ntBASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 CKBP1-201ENST00000565489 1086 ntBASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 AL049637.2-201ENST00000641778 930 ntBASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE9Q8IYJ1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE9Q8IYJ1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms