Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71Q8IV32 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 AP000997.3-201ENST00000623333 2250 ntBASIC17.65■□□□□ 0.42
CCDC71Q8IV32 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC71Q8IV32 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC71Q8IV32 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC71Q8IV32 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC71Q8IV32 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC71Q8IV32 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC71Q8IV32 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
CCDC71Q8IV32 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 TMPOP1-202ENST00000424642 1267 ntBASIC17.63■□□□□ 0.41
CCDC71Q8IV32 RBM17P1-201ENST00000453646 1190 ntBASIC17.63■□□□□ 0.41
CCDC71Q8IV32 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 ZNF815P-204ENST00000434898 1737 ntBASIC17.63■□□□□ 0.41
CCDC71Q8IV32 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC71Q8IV32 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC71Q8IV32 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms