Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.8■□□□□ 0.6
LDB1Q86U70 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDB1Q86U70 AC009113.1-201ENST00000570267 2443 ntBASIC18.8■□□□□ 0.6
LDB1Q86U70 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LDB1Q86U70 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
LDB1Q86U70 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LDB1Q86U70 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 AL355355.2-201ENST00000442321 338 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 SLC25A1P4-201ENST00000567977 778 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.79■□□□□ 0.6
LDB1Q86U70 AP001412.1-201ENST00000608405 714 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.79■□□□□ 0.6
LDB1Q86U70 AC026471.5-201ENST00000615068 467 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 ANO7L1-203ENST00000602586 1720 ntBASIC18.79■□□□□ 0.6
LDB1Q86U70 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.79■□□□□ 0.6
LDB1Q86U70 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.79■□□□□ 0.6
LDB1Q86U70 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.79■□□□□ 0.6
LDB1Q86U70 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LDB1Q86U70 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.78■□□□□ 0.6
LDB1Q86U70 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.78■□□□□ 0.6
LDB1Q86U70 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.78■□□□□ 0.6
LDB1Q86U70 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.78■□□□□ 0.6
LDB1Q86U70 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
LDB1Q86U70 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB1Q86U70 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB1Q86U70 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LDB1Q86U70 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB1Q86U70 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LDB1Q86U70 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB1Q86U70 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB1Q86U70 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.77■□□□□ 0.6
LDB1Q86U70 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.77■□□□□ 0.6
LDB1Q86U70 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB1Q86U70 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB1Q86U70 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB1Q86U70 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB1Q86U70 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB1Q86U70 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDB1Q86U70 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDB1Q86U70 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LDB1Q86U70 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LDB1Q86U70 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
LDB1Q86U70 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms