Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC149Q6ZUS6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 TREX1-205ENST00000625293 1783 ntBASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 AP002383.4-201ENST00000442518 975 ntBASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 RCC2P3-201ENST00000418112 1537 ntBASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC149Q6ZUS6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AL512353.2-201ENST00000448759 1962 ntBASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 KRT8P26-201ENST00000534154 1276 ntBASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 AL157888.1-201ENST00000631930 593 ntBASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 TEX21P-204ENST00000641479 1693 ntBASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC149Q6ZUS6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 HLA-F-220ENST00000434407 884 ntBASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 NUS1P1-201ENST00000446295 882 ntBASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 AL136038.4-201ENST00000603606 1261 ntBASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 AL162741.1-201ENST00000565563 1558 ntBASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC149Q6ZUS6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms