Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AC233702.5-201ENST00000584107 538 ntBASIC19.03■□□□□ 0.64
PACS1Q6VY07 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACS1Q6VY07 AC079598.2-202ENST00000546624 1451 ntBASIC19.03■□□□□ 0.64
PACS1Q6VY07 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PACS1Q6VY07 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 RPS2P55-201ENST00000397318 883 ntBASIC19.02■□□□□ 0.64
PACS1Q6VY07 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 AC107956.1-201ENST00000494359 873 ntBASIC19.02■□□□□ 0.64
PACS1Q6VY07 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PACS1Q6VY07 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACS1Q6VY07 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.02■□□□□ 0.63
PACS1Q6VY07 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.02■□□□□ 0.63
PACS1Q6VY07 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PACS1Q6VY07 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.01■□□□□ 0.63
PACS1Q6VY07 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 KRT8P41-201ENST00000533985 1514 ntBASIC19.01■□□□□ 0.63
PACS1Q6VY07 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 BICD1-207ENST00000551848 1962 ntBASIC19.01■□□□□ 0.63
PACS1Q6VY07 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.01■□□□□ 0.63
PACS1Q6VY07 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 AP001412.1-201ENST00000608405 714 ntBASIC19.01■□□□□ 0.63
PACS1Q6VY07 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PACS1Q6VY07 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PACS1Q6VY07 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19■□□□□ 0.63
PACS1Q6VY07 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19■□□□□ 0.63
PACS1Q6VY07 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 CR392000.1-201ENST00000624770 1228 ntBASIC19■□□□□ 0.63
PACS1Q6VY07 ABBA01031674.1-201ENST00000635145 728 ntBASIC19■□□□□ 0.63
PACS1Q6VY07 AL031985.4-201ENST00000642138 673 ntBASIC19■□□□□ 0.63
PACS1Q6VY07 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PACS1Q6VY07 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms