Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 AP001412.1-201ENST00000608405 714 ntBASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 AC093525.10-201ENST00000625130 1569 ntBASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NHLRC1Q6VVB1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AL031598.1-201ENST00000561511 1773 ntBASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 FAM207BP-201ENST00000447172 505 ntBASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 REXO1L10P-201ENST00000615707 1290 ntBASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 REXO1L12P-201ENST00000622156 912 ntBASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NHLRC1Q6VVB1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 AC096733.2-201ENST00000609937 1394 ntBASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NHLRC1Q6VVB1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 KRT8P3-201ENST00000519669 1449 ntBASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 AC020763.4-201ENST00000623414 4170 ntBASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 AC083906.6-201ENST00000641366 219 ntBASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NHLRC1Q6VVB1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms