Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 AC073195.1-201ENST00000607241 877 ntBASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 IRX1P1-201ENST00000438849 1838 ntBASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN4Q6PJG9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 CR392000.1-201ENST00000624770 1228 ntBASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN4Q6PJG9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 FEM1AP3-201ENST00000403722 1741 ntBASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 FP475955.4-201ENST00000623131 1990 ntBASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 KRT16P1-201ENST00000399124 1418 ntBASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 AL135905.2-201ENST00000584934 1404 ntBASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.93■□□□□ 0.3
LRFN4Q6PJG9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms