Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AC012306.2-201ENST00000609350 630 ntBASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 BX323043.1-201ENST00000641006 1765 ntBASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 BCL2-203ENST00000589955 5011 ntBASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC01556Q5JQF7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AL049812.1-201ENST00000432563 2267 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 RCC2P3-201ENST00000418112 1537 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AL023284.2-201ENST00000405850 579 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AC211429.1-201ENST00000415277 523 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 FAM87A-204ENST00000613235 858 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 AC008622.2-201ENST00000617006 1229 ntBASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01556Q5JQF7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 GPAT2P1-201ENST00000444924 1672 ntBASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 HEIH-201ENST00000623091 1652 ntBASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
LINC01556Q5JQF7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01556Q5JQF7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms