Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.79■□□□□ 0.76
USP46P62068 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.78■□□□□ 0.76
USP46P62068 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
USP46P62068 KRT18P38-201ENST00000449496 1282 ntBASIC19.78■□□□□ 0.76
USP46P62068 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.78■□□□□ 0.76
USP46P62068 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.78■□□□□ 0.76
USP46P62068 GCSHP2-201ENST00000560971 527 ntBASIC19.78■□□□□ 0.76
USP46P62068 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.78■□□□□ 0.76
USP46P62068 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.78■□□□□ 0.76
USP46P62068 AL031432.5-201ENST00000641059 760 ntBASIC19.78■□□□□ 0.76
USP46P62068 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP46P62068 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.78■□□□□ 0.76
USP46P62068 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.78■□□□□ 0.76
USP46P62068 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP46P62068 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.77■□□□□ 0.76
USP46P62068 AC092647.4-201ENST00000457211 535 ntBASIC19.77■□□□□ 0.76
USP46P62068 AL359075.1-203ENST00000462729 1002 ntBASIC19.77■□□□□ 0.76
USP46P62068 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 NEK4P2-201ENST00000580004 1012 ntBASIC19.77■□□□□ 0.76
USP46P62068 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
USP46P62068 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP46P62068 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
USP46P62068 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP46P62068 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP46P62068 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
USP46P62068 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
USP46P62068 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP46P62068 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP46P62068 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP46P62068 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.76■□□□□ 0.75
USP46P62068 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.76■□□□□ 0.75
USP46P62068 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.76■□□□□ 0.75
USP46P62068 AL512353.2-201ENST00000448759 1962 ntBASIC19.76■□□□□ 0.75
USP46P62068 FP475955.4-201ENST00000623131 1990 ntBASIC19.76■□□□□ 0.75
USP46P62068 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 AL031133.1-201ENST00000406807 723 ntBASIC19.76■□□□□ 0.75
USP46P62068 MCCD1P1-208ENST00000445732 328 ntBASIC19.76■□□□□ 0.75
USP46P62068 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
USP46P62068 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
USP46P62068 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.76■□□□□ 0.75
USP46P62068 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP46P62068 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms