Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SEC61A1P61619 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 MIR718-201ENST00000390190 70 ntBASIC16.47■□□□□ 0.23
SEC61A1P61619 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.47■□□□□ 0.23
SEC61A1P61619 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.47■□□□□ 0.23
SEC61A1P61619 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.47■□□□□ 0.23
SEC61A1P61619 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SEC61A1P61619 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SEC61A1P61619 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SEC61A1P61619 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SEC61A1P61619 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.46■□□□□ 0.23
SEC61A1P61619 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 SNORA78-201ENST00000459373 127 ntBASIC16.46■□□□□ 0.23
SEC61A1P61619 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.46■□□□□ 0.23
SEC61A1P61619 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.46■□□□□ 0.23
SEC61A1P61619 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.46■□□□□ 0.23
SEC61A1P61619 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.46■□□□□ 0.23
SEC61A1P61619 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61A1P61619 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SEC61A1P61619 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.45■□□□□ 0.22
SEC61A1P61619 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 RPS2P55-201ENST00000397318 883 ntBASIC16.45■□□□□ 0.22
SEC61A1P61619 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SEC61A1P61619 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 AC107956.1-201ENST00000494359 873 ntBASIC16.45■□□□□ 0.22
SEC61A1P61619 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.45■□□□□ 0.22
SEC61A1P61619 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.45■□□□□ 0.22
SEC61A1P61619 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
SEC61A1P61619 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61A1P61619 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.44■□□□□ 0.22
SEC61A1P61619 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms