Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN20P56880 AC211429.1-201ENST00000415277 523 ntBASIC17.26■□□□□ 0.35
CLDN20P56880 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN20P56880 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN20P56880 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CLDN20P56880 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN20P56880 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN20P56880 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN20P56880 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 AC120498.9-201ENST00000339021 3867 ntBASIC17.25■□□□□ 0.35
CLDN20P56880 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN20P56880 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN20P56880 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN20P56880 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN20P56880 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 AL390961.4-201ENST00000623958 2535 ntBASIC17.25■□□□□ 0.35
CLDN20P56880 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN20P56880 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN20P56880 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN20P56880 CYP2D8P-201ENST00000433633 1490 ntBASIC17.24■□□□□ 0.35
CLDN20P56880 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN20P56880 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN20P56880 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 MFAP1P1-201ENST00000442257 1255 ntBASIC17.24■□□□□ 0.35
CLDN20P56880 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN20P56880 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN20P56880 AP005242.2-201ENST00000580065 1175 ntBASIC17.24■□□□□ 0.35
CLDN20P56880 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN20P56880 AC133561.5-201ENST00000635547 218 ntBASIC17.24■□□□□ 0.35
CLDN20P56880 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 AP000997.3-201ENST00000623333 2250 ntBASIC17.24■□□□□ 0.35
CLDN20P56880 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN20P56880 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN20P56880 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 KRT8P11-201ENST00000409686 1436 ntBASIC17.23■□□□□ 0.35
CLDN20P56880 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN20P56880 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 ECEL1P3-201ENST00000427961 737 ntBASIC17.23■□□□□ 0.35
CLDN20P56880 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN20P56880 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 AC096733.2-201ENST00000609937 1394 ntBASIC17.23■□□□□ 0.35
CLDN20P56880 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN20P56880 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN20P56880 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms