Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CLDN6P56747 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN6P56747 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN6P56747 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN6P56747 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN6P56747 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN6P56747 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 GABARAPL3-202ENST00000624044 1851 ntBASIC18.06■□□□□ 0.48
CLDN6P56747 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 MCCD1P1-208ENST00000445732 328 ntBASIC18.06■□□□□ 0.48
CLDN6P56747 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CLDN6P56747 AL160237.2-201ENST00000556165 472 ntBASIC18.06■□□□□ 0.48
CLDN6P56747 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN6P56747 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.06■□□□□ 0.48
CLDN6P56747 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN6P56747 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN6P56747 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLDN6P56747 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN6P56747 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 MRPL3P1-201ENST00000400109 1033 ntBASIC18.05■□□□□ 0.48
CLDN6P56747 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN6P56747 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 KRT18P31-201ENST00000506277 1292 ntBASIC18.05■□□□□ 0.48
CLDN6P56747 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN6P56747 MIR3180-5-201ENST00000583743 153 ntBASIC18.05■□□□□ 0.48
CLDN6P56747 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLDN6P56747 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLDN6P56747 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN6P56747 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN6P56747 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN6P56747 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN6P56747 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN6P56747 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN6P56747 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.04■□□□□ 0.48
CLDN6P56747 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN6P56747 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN6P56747 SLC25A6P4-201ENST00000586535 553 ntBASIC18.04■□□□□ 0.48
CLDN6P56747 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN6P56747 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN6P56747 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 AL162377.1-201ENST00000618844 1793 ntBASIC18.04■□□□□ 0.48
CLDN6P56747 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN6P56747 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN6P56747 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN6P56747 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN6P56747 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN6P56747 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLDN6P56747 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms