Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLCN3P51790 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN3P51790 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCN3P51790 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN3P51790 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCN3P51790 AC116407.4-201ENST00000623319 1061 ntBASIC20.69■□□□□ 0.9
CLCN3P51790 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.69■□□□□ 0.9
CLCN3P51790 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCN3P51790 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLCN3P51790 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLCN3P51790 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN3P51790 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.68■□□□□ 0.9
CLCN3P51790 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLCN3P51790 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CLCN3P51790 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.68■□□□□ 0.9
CLCN3P51790 AC034232.1-201ENST00000506026 1064 ntBASIC20.68■□□□□ 0.9
CLCN3P51790 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 AL136038.3-201ENST00000561909 1096 ntBASIC20.68■□□□□ 0.9
CLCN3P51790 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CLCN3P51790 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.68■□□□□ 0.9
CLCN3P51790 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN3P51790 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN3P51790 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN3P51790 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 HBZP1-201ENST00000354915 429 ntBASIC20.67■□□□□ 0.9
CLCN3P51790 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN3P51790 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN3P51790 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLCN3P51790 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.67■□□□□ 0.9
CLCN3P51790 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLCN3P51790 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN3P51790 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 KRT18P23-201ENST00000435622 1283 ntBASIC20.66■□□□□ 0.9
CLCN3P51790 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN3P51790 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN3P51790 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN3P51790 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN3P51790 AL157888.1-201ENST00000631930 593 ntBASIC20.66■□□□□ 0.9
CLCN3P51790 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.66■□□□□ 0.9
CLCN3P51790 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLCN3P51790 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN3P51790 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN3P51790 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN3P51790 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
CLCN3P51790 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCN3P51790 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN3P51790 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCN3P51790 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN3P51790 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN3P51790 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms