Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDC34P49427 AC012313.1-201ENST00000593393 3059 ntBASIC14.88□□□□□ -0.03
CDC34P49427 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.88□□□□□ -0.03
CDC34P49427 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC34P49427 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC34P49427 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CDC34P49427 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC34P49427 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDC34P49427 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CDC34P49427 GNAS-203ENST00000306120 1878 ntBASIC14.87□□□□□ -0.03
CDC34P49427 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC34P49427 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC34P49427 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC34P49427 AC139713.2-201ENST00000641328 2723 ntBASIC14.87□□□□□ -0.03
CDC34P49427 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDC34P49427 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CDC34P49427 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CDC34P49427 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.87□□□□□ -0.03
CDC34P49427 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC34P49427 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC34P49427 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CDC34P49427 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC34P49427 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC34P49427 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDC34P49427 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CDC34P49427 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CDC34P49427 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC34P49427 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC34P49427 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC34P49427 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.86□□□□□ -0.03
CDC34P49427 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC34P49427 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC34P49427 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC34P49427 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC34P49427 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC34P49427 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms