Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CX3CR1P49238 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.56■□□□□ 0.24
CX3CR1P49238 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.55■□□□□ 0.24
CX3CR1P49238 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 WIZP1-201ENST00000531444 2299 ntBASIC16.55■□□□□ 0.24
CX3CR1P49238 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
CX3CR1P49238 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.55■□□□□ 0.24
CX3CR1P49238 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CX3CR1P49238 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CX3CR1P49238 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.54■□□□□ 0.24
CX3CR1P49238 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CX3CR1P49238 AC004980.1-204ENST00000429707 299 ntBASIC16.54■□□□□ 0.24
CX3CR1P49238 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CX3CR1P49238 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.54■□□□□ 0.24
CX3CR1P49238 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.54■□□□□ 0.24
CX3CR1P49238 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.54■□□□□ 0.24
CX3CR1P49238 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CX3CR1P49238 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CX3CR1P49238 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.54■□□□□ 0.24
CX3CR1P49238 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CX3CR1P49238 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.53■□□□□ 0.24
CX3CR1P49238 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.53■□□□□ 0.24
CX3CR1P49238 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CR1P49238 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CR1P49238 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CR1P49238 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 ANO7L1-203ENST00000602586 1720 ntBASIC16.53■□□□□ 0.24
CX3CR1P49238 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CR1P49238 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CR1P49238 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CR1P49238 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms