Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.49■■□□□ 1.03
TM4SF4P48230 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TM4SF4P48230 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.49■■□□□ 1.03
TM4SF4P48230 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TM4SF4P48230 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.49■■□□□ 1.03
TM4SF4P48230 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TM4SF4P48230 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.48■■□□□ 1.03
TM4SF4P48230 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.48■■□□□ 1.03
TM4SF4P48230 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.48■■□□□ 1.03
TM4SF4P48230 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.48■■□□□ 1.03
TM4SF4P48230 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.48■■□□□ 1.03
TM4SF4P48230 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.48■■□□□ 1.03
TM4SF4P48230 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM4SF4P48230 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TM4SF4P48230 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TM4SF4P48230 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.47■■□□□ 1.03
TM4SF4P48230 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.47■■□□□ 1.03
TM4SF4P48230 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.47■■□□□ 1.03
TM4SF4P48230 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.47■■□□□ 1.03
TM4SF4P48230 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.47■■□□□ 1.03
TM4SF4P48230 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.47■■□□□ 1.03
TM4SF4P48230 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.47■■□□□ 1.03
TM4SF4P48230 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM4SF4P48230 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.47■■□□□ 1.03
TM4SF4P48230 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TM4SF4P48230 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TM4SF4P48230 GPX1P2-201ENST00000429271 606 ntBASIC21.46■■□□□ 1.03
TM4SF4P48230 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.46■■□□□ 1.03
TM4SF4P48230 AC112482.1-201ENST00000492080 688 ntBASIC21.46■■□□□ 1.03
TM4SF4P48230 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 AC096582.2-201ENST00000510860 516 ntBASIC21.46■■□□□ 1.03
TM4SF4P48230 AC010327.4-202ENST00000591484 748 ntBASIC21.46■■□□□ 1.03
TM4SF4P48230 AL356488.2-201ENST00000602755 427 ntBASIC21.46■■□□□ 1.03
TM4SF4P48230 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TM4SF4P48230 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
TM4SF4P48230 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.46■■□□□ 1.03
TM4SF4P48230 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM4SF4P48230 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
TM4SF4P48230 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 RBM17P3-201ENST00000417687 1192 ntBASIC21.45■■□□□ 1.02
TM4SF4P48230 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.45■■□□□ 1.02
TM4SF4P48230 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.45■■□□□ 1.02
TM4SF4P48230 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.45■■□□□ 1.02
TM4SF4P48230 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.45■■□□□ 1.02
TM4SF4P48230 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.45■■□□□ 1.02
TM4SF4P48230 AC104109.2-201ENST00000602919 1418 ntBASIC21.45■■□□□ 1.02
TM4SF4P48230 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TM4SF4P48230 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM4SF4P48230 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.44■■□□□ 1.02
TM4SF4P48230 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.44■■□□□ 1.02
TM4SF4P48230 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TM4SF4P48230 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TM4SF4P48230 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TM4SF4P48230 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.44■■□□□ 1.02
TM4SF4P48230 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms