Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20■□□□□ 0.79
SSR1P43307 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20■□□□□ 0.79
SSR1P43307 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20■□□□□ 0.79
SSR1P43307 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSR1P43307 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20■□□□□ 0.79
SSR1P43307 C1QBPP2-201ENST00000528754 825 ntBASIC20■□□□□ 0.79
SSR1P43307 AC110285.5-201ENST00000611501 352 ntBASIC20■□□□□ 0.79
SSR1P43307 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SSR1P43307 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSR1P43307 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20■□□□□ 0.79
SSR1P43307 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20■□□□□ 0.79
SSR1P43307 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSR1P43307 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SSR1P43307 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.99■□□□□ 0.79
SSR1P43307 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.99■□□□□ 0.79
SSR1P43307 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.99■□□□□ 0.79
SSR1P43307 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 AC128676.1-201ENST00000454392 318 ntBASIC19.99■□□□□ 0.79
SSR1P43307 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.99■□□□□ 0.79
SSR1P43307 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.99■□□□□ 0.79
SSR1P43307 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.99■□□□□ 0.79
SSR1P43307 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.99■□□□□ 0.79
SSR1P43307 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.99■□□□□ 0.79
SSR1P43307 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.99■□□□□ 0.79
SSR1P43307 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR1P43307 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SSR1P43307 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSR1P43307 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.98■□□□□ 0.79
SSR1P43307 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SSR1P43307 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SSR1P43307 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
SSR1P43307 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR1P43307 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSR1P43307 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SSR1P43307 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SSR1P43307 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SSR1P43307 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 POU5F1P3-201ENST00000428824 1078 ntBASIC19.97■□□□□ 0.79
SSR1P43307 TSPY21P-201ENST00000433481 731 ntBASIC19.97■□□□□ 0.79
SSR1P43307 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.97■□□□□ 0.79
SSR1P43307 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.97■□□□□ 0.79
SSR1P43307 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SSR1P43307 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.97■□□□□ 0.79
SSR1P43307 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.97■□□□□ 0.79
SSR1P43307 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR1P43307 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SSR1P43307 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR1P43307 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms