Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF9P41273 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF9P41273 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
TNFSF9P41273 AL441883.1-201ENST00000566170 1045 ntBASIC20.37■□□□□ 0.85
TNFSF9P41273 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TNFSF9P41273 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.37■□□□□ 0.85
TNFSF9P41273 AC010331.1-201ENST00000611423 582 ntBASIC20.37■□□□□ 0.85
TNFSF9P41273 AC011558.1-201ENST00000623459 338 ntBASIC20.37■□□□□ 0.85
TNFSF9P41273 HEIH-201ENST00000623091 1652 ntBASIC20.37■□□□□ 0.85
TNFSF9P41273 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF9P41273 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF9P41273 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFSF9P41273 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFSF9P41273 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF9P41273 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TNFSF9P41273 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TNFSF9P41273 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.36■□□□□ 0.85
TNFSF9P41273 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.36■□□□□ 0.85
TNFSF9P41273 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFSF9P41273 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 MTMR9LP-203ENST00000426597 1545 ntBASIC20.36■□□□□ 0.85
TNFSF9P41273 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TNFSF9P41273 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TNFSF9P41273 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TNFSF9P41273 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF9P41273 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF9P41273 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TNFSF9P41273 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFSF9P41273 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFSF9P41273 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFSF9P41273 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.35■□□□□ 0.85
TNFSF9P41273 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFSF9P41273 AL049597.2-201ENST00000565575 961 ntBASIC20.35■□□□□ 0.85
TNFSF9P41273 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TNFSF9P41273 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.35■□□□□ 0.85
TNFSF9P41273 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF9P41273 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFSF9P41273 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFSF9P41273 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF9P41273 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.35■□□□□ 0.85
TNFSF9P41273 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TNFSF9P41273 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.34■□□□□ 0.85
TNFSF9P41273 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TNFSF9P41273 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
TNFSF9P41273 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF9P41273 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFSF9P41273 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFSF9P41273 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF9P41273 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF9P41273 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF9P41273 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF9P41273 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 AP000974.1-201ENST00000623909 2387 ntBASIC20.33■□□□□ 0.85
TNFSF9P41273 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF9P41273 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.33■□□□□ 0.85
TNFSF9P41273 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms